Germany: Postdoctoral Scientist position in Bioinformatics/ Computational Biology/ Plant Genomics

The Max Planck Institute for Molecular Genetics is an international research institute with approximately
350 employees. A special focus lies on genome analysis of man and other organisms.

The Department “Vertebrate Genomics”, group “Comparative and Functional Genomics” (Head: Dr. Heinz Himmelbauer), invites applications for the following open position:

Postdoctoral Scientist (f/m)

Bioinformatics/Computational Biology/Plant Genomics

(TVöD E13)

Code: 13-12 L

Responsibilities:
The AnnoBeet project is funded by the German Ministry for Education and Research with the goal to analyse the genome sequence of the crop plant sugar beet (Beta vulgaris) with respect to structural variation and gene functions. The successful candidate will pursue projects related to genomic sequencing data. She/He will adapt existing tools or implement new software to assemble high-fidelity genome sequences from wild-derived and domesticated beets. Data are mainly from the Illumina sequencing platform but also from other technologies which enable the generation of long reads. Assembled genomes will be compared to related genomes to extract and interpret biologically relevant differences.

Qualifications:
We are looking for a scientist (PhD in bioinformatics or related field) with solid programming skills (ideally experience in developing sequence analysis tools), experience in handling (large) sequencing data sets, knowledge of molecular genetics and understanding of lab methods and also knowledge of genome sequencing concepts. Experience in analysis of Illumina sequencing data is an advantage.  

The group has successfully performed several projects using 454- and Illumina technologies. We recently completed a reference sequence for the sugar beet genome (http://bvseq.molgen.mpg.de). We are a multidisciplinary team and offer work in a lively and friendly atmosphere and state-of-the art computing infrastructure. We are looking forward to expanding our team by a dedicated and strongly motivated person with distinct interest in the challenges of modern sequencing technologies.

The position is initially available for one year. The working place will be at the Center for Genomic Regulation (http://www.crg.es) in Barcelona/Spain. It is located at the seafront close to the Olympic harbor and combines excellent science with an inspiring environment in the heart of Barcelona with its cultural attractions, beach and metropolitan flair. The employment contract will be concluded with the Max Planck Institute for Molecular Genetics in Berlin/Germany. The salary will be according to the German collective agreement for the public service (TVöD), depending on academic level and previous experience.

The  Max  Planck  Society  is  committed  to  employing  more  handicapped  individuals  and  especially encourages them to apply. The Max Planck Society seeks to increase the number of women in those areas where they are underrepresented and therefore explicitly encourages women to apply.

Send application to: 
For informal inquiries by e-mail, please contact Dr. Heinz Himmelbauer (himmelbauer@molgen.mpg.de). Applications including summary of Master's and PhD theses, publication list, and contact details for three references should be sent by August 16, 2013 via e-mail to:
 
job-1312@molgen.mpg.de

Biologist Postdoctoral Fellow to study plant cell wall, United States

The focus of this postdoctoral position is to perform research to better understand how plant cell walls are synthesized. This position works under the direction of the Director of the Structural Biology department at the Joint BioEnergy Institute (JBEI). Primary duties and responsibilities will include the development and implementation of methods for the cloning, expression and purification of proteins involved in plant cell wall synthesis, in particular glycosyl transferases (GTs). As a postdoctoral associate you will develop approaches to the expression of plant cell wall GTs in heterologous systems, including insect cells. In collaboration with other researchers in the Structural Biology Department X-ray crystallography will be used to determine the three-dimensional structures of these enzymes. In collaboration with the JBEI Feedstocks Division these enzymes will be biochemically characterized. This appointment provides the opportunity to learn and/or further develop crystallographic skills.

To apply

For full consideration, follow the link below to job posting and apply directly to Berkeley Lab.  As part of the online application process, please complete a profile, including uploading attachments relevant to the opportunity. 

https://lbl.taleo.net/careersection/2/jobdetail.ftl?lang=en&job=76029

Berkeley Lab is an affirmative action/equal opportunity employer committed to the development of a diverse workforce.

Australia Post Doctoral Fellowship in CSIRO Plant industry 2013

• Your chance to research one of the world's most significant wheat diseases!
• Excellent development opportunity within a large multi-faceted organisation
• Join our team at CSIRO - Australia's premier science & technology research organisation!

The Position:
Applicants are invited to apply for a three year Post Doctoral Fellowship in CSIRO Plant industry, Australia’s premier plant science institute. This project will work on Puccinia graminis tritici (Pgt), the causal agent of wheat stem rust disease, one of the most important wheat diseases worldwide. The position will be with the Rust Research group located at CSIRO laboratories at Black Mountain in Canberra ACT. This project aims to gain a better understanding of how Pgt effectors are recognised by host resistance genes and contribute to causing disease.


Specifically you will:

• Screen effector candidates in a set of wheat lines containing various resistance genes, as this has identified one effector candidate that triggers host-genotype dependent cell death.
• Continue this screening process to identify further Avr gene candidates recognised by wheat resistance genes.
• Conduct functional analysis of selected effector candidates including determining subcellular localisation in host cells and screening for host target proteins by yeast-two-hybrid and pull-down assays.

Location: Black Mountain, ACT
Salary: $75K-$85K plus up to 15.4% superannuation
Tenure: 3 year term
Reference: ACT13/01796

To be successful in this position you will need:

• A PhD in molecular/cell biology or equivalent area;
• Demonstrated research experience in and knowledge of molecular plant-pathogen interactions;
• Ability to combine bioinformatic and functional approaches to solving biological problems;
• Demonstrated ability to define, investigate and solve complex problems in plant biology using diverse established experimental procedures and new technologies to get answers to difficult scientific questions;
• Record of research publications in peer-reviewed English language journals commensurate with research experience;

Who we are: The Commonwealth Scientific and Industrial Research Organisation (CSIRO) is one of the largest and most diverse scientific organisations in the world. By igniting the creative spirit of our people, we deliver great science and innovative solutions that benefit industry, society and the environment.

About CSIRO Division of Plant Industry:   CSIRO’s Division of Plant Industry is promoting profitable and sustainable agrifood, fibre and horticultural industries, developing new plant products and improving natural resource management through world-leading research.
http://www.csiro.au/Organisation-Structure/Divisions/Plant-Industry.aspx

To apply

For further information and to apply online please visit our website at CSIRO CAREERS, choose "Positions Vacant" then "Job Search" and insert Reference Number ACT13/01796 where indicated.

Applications close: 9 June 2013

Postdoc position in Molecular Plant Biology at Austria

A postdoctoral position studying plant shoot development is available in the group of Thomas Greb at the Gregor Mendel Institute (GMI), Vienna, Austria.

Our group investigates the process of stem thickening as an example for addressing mechanisms of growth regulation by short- and long-distance cell-to-cell communication in an evolutionary perspective. It is envisaged that the successful applicant will decipher the intra-species variation of stem thickening using Arabidopsis as a model system. Alternative projects are available on request.

The GMI focus on basic plant research, provides a highly dynamic and stimulating research atmosphere and is embedded in the attractive scientific environment of the Vienna Biocenter (VBC). For more information on the project or the general setup, please view our website pages or contact Thomas Greb directly.

Successful applicants will be highly motivated, have outstanding communication skills, have published (or be close to publishing) in major international journals and be capable of working independently. Experience in some or all of the following disciplines is desirable: plant development, genetics, histology, molecular biology, computational biology and/or population genetics. To qualify for the position applicants should have a PhD degree or equivalent obtained in a related field, preferably no longer than three years ago.

Please send an email including a cover letter describing your motivation, CV and contact details for two referees to Thomas Greb (thomas.greb(at)gmi.oeaw.ac.at). Applications will be reviewed until a suitable candidate is found.

http://www.gmi.oeaw.ac.at/job-opportunties/postdoctoral-position-in-plant-shoot-development